STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X1WBT0_DANRESi:dkey-105h12.2. (1440 aa)    
Predicted Functional Partners:
c6
Complement component 6.
   
  
 0.728
ntd5
Ntl-dependent gene 5.
    
 
 0.671
spink2.2
Serine peptidase inhibitor, Kazal type 2, tandem duplicate 2.
      
 0.670
ENSDARP00000133993
Si:dkey-203a12.5.
      
 0.670
ENSDARP00000135998
Si:dkey-77g12.4.
      
 0.670
ENSDARP00000138418
Si:dkey-203a12.4.
      
 0.670
hp
Haptoglobin.
   
 
 0.652
c7b
Complement component 7b.
   
 
 0.633
c8a
Complement component 8, alpha polypeptide.
   
 
 0.595
sema4e
Semaphorin-4E.
      
 0.584
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.