STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fxyd6lFXYD domain-containing ion transport regulator; Belongs to the FXYD family. (83 aa)    
Predicted Functional Partners:
rbm4.3
RNA-binding motif protein 4.3.
      
 0.743
lrrc4bb
Leucine-rich repeat-containing 4Bb.
      
 0.742
ier5l
Immediate early response gene 5-like protein; Belongs to the IER family.
      
 0.742
wu:fb59d01
Wu:fb59d01.
      
 0.742
or129-1
Odorant receptor, family H, subfamily 129, member 1.
      
 0.741
naa25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
      
 0.740
lrrc4.2
Leucine-rich repeat-containing 4.2.
      
 0.669
cabp5b
Calcium-binding protein 5b.
      
 0.669
ildr1a
Immunoglobulin-like domain-containing receptor 1a.
      
 0.669
cabp5a
Calcium-binding protein 5a.
      
 0.668
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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