STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aifm4Apoptosis-inducing factor mitochondria-associated 4. (530 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.765
pik3r3a
Phosphoinositide-3-kinase, regulatory subunit 3a (gamma).
      
 0.745
zgc:92275
Neverland.
  
 
 0.690
fosaa
V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.
      
 0.683
aifm2
Apoptosis-inducing factor mitochondria-associated 2.
      
 0.681
fdx1b
Ferredoxin 1b.
  
 0.658
fdx1
Ferredoxin 1.
  
 0.654
fdx2
Ferredoxin-2, mitochondrial; Essential for heme A and Fe/S protein biosynthesis.
  
 0.654
ptgr1
Prostaglandin reductase 1.
   
  
 0.653
gldc
Glycine dehydrogenase (decarboxylating).
   
 
 0.650
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.