STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101884131Peptidase S1 domain-containing protein. (236 aa)    
Predicted Functional Partners:
syngr3b
Synaptogyrin.
      
 0.836
reep3b
Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.
      
 0.833
cpa2
Carboxypeptidase A2 (pancreatic).
   
 
 0.783
cpb1
Carboxypeptidase B1 (tissue).
   
 
 0.765
cpa1
Carboxypeptidase A1 (pancreatic).
   
 
 0.702
cyp2k18
Cytochrome P450, family 2, subfamily K, polypeptide 18.
    
 
 0.624
F1QWR2_DANRE
Si:ch211-153b23.4.
      
 0.551
si:dkey-21e2.3-2
Si:dkey-21e2.3; Belongs to the peptidase S1 family.
  
    0.528
si:dkey-78l4.8
Si:dkey-78l4.8; Belongs to the peptidase S1 family.
  
     0.526
ENSDARP00000156938
Si:ch211-212d10.1; Belongs to the peptidase S1 family.
  
    0.525
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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