STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100148066Neurexophilin; May be signaling molecules that resemble neuropeptides. (227 aa)    
Predicted Functional Partners:
TAFA3
Si:dkey-238f9.1.
  
     0.535
tafa4a
TAFA chemokine-like family member 4a.
  
     0.535
ENSDARP00000133247
Uncharacterized protein.
  
     0.528
brinp3b
Bone morphogenetic protein/retinoic acid-inducible neural-specific 3b.
  
     0.522
zgc:153675
Zgc:153675.
  
     0.511
lpar1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
  
     0.507
cryba1b
Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.
  
     0.505
ENSDARP00000155841
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.500
mc4r
Melanocortin receptor 4; Receptor specific to the heptapeptide core common to adrenocorticotropic hormone and alpha-, beta-, and gamma-MSH. Plays a central role in energy homeostasis and somatic growth. This receptor is mediated by G proteins that stimulate adenylate cyclase (cAMP).
  
     0.499
brinp3a.1
Bone morphogenetic protein/retinoic acid-inducible neural-specific 3a, tandem duplicate 1.
  
     0.498
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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