STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc135Coiled-coil domain-containing 135. (843 aa)    
Predicted Functional Partners:
spa17
Sperm autoantigenic protein 17.
      
 0.860
ak8
Adenylate kinase 8; Nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has highest activity toward AMP, and weaker activity toward dAMP, CMP and dCMP. Also displays broad nucleoside diphosphate kinase activity.
      
 0.804
ankdd1a
Ankyrin repeat and death domain-containing 1A.
      
 0.750
Q1L949_DANRE
Si:ch211-250g4.3.
   
  
 0.748
rsph4a
Radial spoke head component 4A.
  
  
 0.747
TMEM151A
Transmembrane protein 151A.
      
 0.745
LOC101882069
Transmembrane protein 151A.
      
 0.745
sowahd
Sosondowah ankyrin repeat domain family d.
      
 0.745
ccdc170
Coiled-coil domain-containing 170.
      
 0.744
tmem119b
Transmembrane protein 119b.
      
 0.744
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.