STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asic1bAcid-sensing ion channel 1B; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (537 aa)    
Predicted Functional Partners:
stoml3a
Stomatin (EPB72)-like 3a.
    
 0.611
stom
Stomatin.
    
 0.611
stoml3b
Stomatin (EPB72)-like 3b.
    
 0.611
gak
Cyclin G-associated kinase.
      
 0.580
asic2
Acid-sensing ion channel 2; Probable cation channel with high affinity for sodium. In vitro, has no proton-gated channel activity.
  
 
0.548
kcnj14
Potassium inwardly rectifying channel subfamily J member 14.
      
 0.544
kcnk5a
Potassium channel, subfamily K, member 5a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.513
tfcp2
Transcription factor CP2.
      
 0.470
slc9a5
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.453
kcnj1a.1
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 1.
      
 0.439
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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