STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttf2Transcription termination factor, RNA polymerase II. (1145 aa)    
Predicted Functional Partners:
impa1
Inositol-1-monophosphatase.
  
 
 0.943
impa2
Inositol-1-monophosphatase.
  
 
 0.943
rec114
REC114 meiotic recombination protein.
  
 
 0.933
B8JLP5_DANRE
Si:ch1073-75f15.2.
  
 
 0.933
pnkp
Polynucleotide kinase 3'-phosphatase.
  
 
 0.933
psph
Phosphoserine phosphatase.
  
  
 0.897
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
    
  0.861
rad50
RAD50 homolog, double strand break repair protein.
    
 0.857
cs
Citrate synthase, mitochondrial.
    
 0.831
asl
Argininosuccinate lyase.
  
  
 0.800
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.