STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
relaV-rel avian reticuloendotheliosis viral oncogene homolog A. (455 aa)    
Predicted Functional Partners:
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
  
 
0.997
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
  
0.988
rel
V-rel avian reticuloendotheliosis viral oncogene homolog.
  
   
0.978
nfkbiab
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.974
nfkbiaa
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
   
 0.973
il6
Interleukin 6 (interferon, beta 2).
     
 0.962
il1b
Interleukin-1.
   
 
 0.949
nfkbie
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.
   
 0.942
tbk1
TANK-binding kinase 1.
   
 0.940
ifnphi1
Interferon phi 1.
   
 
 0.936
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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