STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc16a6aSolute carrier family 16 member 6a. (495 aa)    
Predicted Functional Partners:
dhx40
DEAH (Asp-Glu-Ala-His) box polypeptide 40.
      
 0.742
trappc11
Trafficking protein particle complex subunit 11; Involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage.
      
 0.720
gfpt1
Glutamine--fructose-6-phosphate transaminase 1.
      
 0.664
slc35f4
Solute carrier family 35 member F4.
      
 0.662
ahcy
S-adenosylhomocysteine hydrolase; Belongs to the adenosylhomocysteinase family.
      
 0.648
cyp4v7
Cytochrome P450, family 4, subfamily V, polypeptide 7; Belongs to the cytochrome P450 family.
   
  
 0.576
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
  
 0.571
cfap70
Cilia and flagella-associated protein 70.
    
 
 0.571
slc7a3a
Solute carrier family 7 member 3a.
      
 0.565
gpr19
G protein-coupled receptor 19.
      
 0.565
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.