STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trilTLR4 interactor with leucine-rich repeats. (758 aa)    
Predicted Functional Partners:
glipr2
GLI pathogenesis-related 2; Belongs to the CRISP family.
      
 0.744
il22ra2
Interleukin 22 receptor, alpha 2.
      
 0.645
ptpn22
Protein tyrosine phosphatase non-receptor type 22.
    
 
 0.606
E7F1V5_DANRE
Uncharacterized protein.
    
 
 0.498
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
   
   0.495
adgrl3.1
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.495
adgrl2b.1-2
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.489
adgrl1a
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
   
   0.489
adgrl2a
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
   
   0.489
gpnmb
Glycoprotein (transmembrane) nmb.
    
 
 0.484
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.