STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC134Coiled-coil domain containing 134. (226 aa)    
Predicted Functional Partners:
mhc1zka
MHC class I antigen ZKA transcript variant 1; Belongs to the MHC class I family.
      
 0.999
mhc1zja
MHC class I antigen ZJA transcript variant 1; Belongs to the MHC class I family.
      
 0.993
mhc1zfa
MHC class I antigen ZFA transcript variant 1; Belongs to the MHC class I family.
      
 0.846
mhc1zea
MHC class I antigen ZEA transcript variant 1; Belongs to the MHC class I family.
      
 0.837
dicp1.1-3
Diverse immunoglobulin domain-containing protein 1.1.
    
 
 0.831
dicp1.3-4
Diverse immunoglobulin domain-containing protein 1.3-4.
      
 0.831
dicp1.1
Diverse immunoglobulin domain-containing protein 1.1.
    
 
 0.816
dicp1.16
Diverse immunoglobulin domain-containing protein 1.16.
      
 0.816
mhc1zaa
Major histocompatibility complex class I ZAA; Belongs to the MHC class I family.
      
 0.802
mhc1zba
MHC class I antigen ZBA transcript variant 1; Belongs to the MHC class I family.
      
 0.744
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.