STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cideaCell death-inducing DFFA-like effector a. (205 aa)    
Predicted Functional Partners:
cidec
Cell death-inducing DFFA-like effector c.
  
 
0.914
ucp1
Uncoupling protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.880
prdm16
Si:ch211-263k4.2.
      
 0.863
cox8b
Cytochrome c oxidase subunit 8B.
   
  
 0.794
dffb
DNA fragmentation factor, beta polypeptide (caspase-activated DNase).
    
 
0.670
dio2
Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine).
      
 0.608
fgf21
Fibroblast growth factor 21; Belongs to the heparin-binding growth factors family.
      
 0.586
lipea
Lipase, hormone-sensitive a.
   
  
 0.573
lipeb
Lipase, hormone-sensitive b.
   
  
 0.573
cox7a2l
Cytochrome c oxidase subunit VIIa polypeptide 2 like.
   
  
 0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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