STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capgbCapping protein (actin filament), gelsolin-like b. (345 aa)    
Predicted Functional Partners:
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
   
  
 0.671
tagapa
T cell activation RhoGTPase-activating protein a.
      
 0.653
klf11b
Kruppel-like factor 11b.
   
 
 0.650
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.591
ccl35.2
Chemokine (C-C motif) ligand 35, duplicate 2.
      
 0.563
tagapb
T cell activation RhoGTPase-activating protein b.
      
 0.561
mhc1uba
Major histocompatibility complex class I UBA protein; Belongs to the MHC class I family.
   
  
 0.542
wasb
WASP actin nucleation-promoting factor b.
   
 
 0.532
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 
 0.525
traj28
T-cell receptor alpha joining 28.
   
  
 0.524
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.