STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tgm1l4Transglutaminase 1-like 4. (727 aa)    
Predicted Functional Partners:
grhl3
Grainyhead-like transcription factor 3.
   
  
 0.583
ywhabl
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide-like; Belongs to the 14-3-3 family.
   
  
 0.571
kcnh7
Potassium channel, voltage-gated eag-related subfamily H, member 7.
   
  
 0.570
hipk3b
Homeodomain-interacting protein kinase 3b.
    
 
 0.491
arhgef19
Rho guanine nucleotide exchange factor (GEF) 19.
      
 0.453
grhl1
Grainyhead-like transcription factor 1.
      
 0.452
tln1
Talin 1.
      
 0.416
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.410
ddc
Dopa decarboxylase.
   
  
 0.408
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
   
  
 0.407
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.