STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap52Cilia and flagella-associated protein 52. (617 aa)    
Predicted Functional Partners:
cfap45
Cilia and flagella-associated protein 45.
   
 
 0.949
cfap53
Cilia- and flagella-associated protein 53; May play a role in the beating of primary cilia and thereby be involved in the establishment of organ laterality during embryogenesis; Belongs to the CFAP53 family.
   
 
 0.948
rsph14
Radial spoke head 14 homolog.
   
 
 0.913
cfap161
Cilia- and flagella-associated protein 161; May play a role in motile cilia function, possibly by acting on dynein arm assembly.
   
 
 0.911
tekt4
Tektin 4.
   
 
 0.909
efhc1
EF-hand domain (C-terminal)-containing 1.
  
 
 0.890
ccdc146
Coiled-coil domain-containing 146.
   
 
 0.858
pacrg
PARK2 co-regulated.
   
 
 0.843
spag6
Sperm-associated antigen 6.
  
 
 0.838
efhc2
EF-hand domain-containing family member C2.
   
 
 0.835
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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