Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E9QJ85_DANRE | canx | ENSDARP00000122942 | ENSDARP00000083454 | Si:ch211-274f20.2. | Calnexin. | 0.907 |
E9QJ85_DANRE | dnajc10 | ENSDARP00000122942 | ENSDARP00000103524 | Si:ch211-274f20.2. | DnaJ (Hsp40) homolog, subfamily C, member 10. | 0.618 |
E9QJ85_DANRE | prkcsh | ENSDARP00000122942 | ENSDARP00000025069 | Si:ch211-274f20.2. | Protein kinase C substrate 80K-H. | 0.586 |
E9QJ85_DANRE | si | ENSDARP00000122942 | ENSDARP00000138640 | Si:ch211-274f20.2. | P-type domain-containing protein. | 0.445 |
canx | E9QJ85_DANRE | ENSDARP00000083454 | ENSDARP00000122942 | Calnexin. | Si:ch211-274f20.2. | 0.907 |
canx | dnajc10 | ENSDARP00000083454 | ENSDARP00000103524 | Calnexin. | DnaJ (Hsp40) homolog, subfamily C, member 10. | 0.619 |
canx | prkcsh | ENSDARP00000083454 | ENSDARP00000025069 | Calnexin. | Protein kinase C substrate 80K-H. | 0.588 |
canx | si | ENSDARP00000083454 | ENSDARP00000138640 | Calnexin. | P-type domain-containing protein. | 0.445 |
clgn | dnajc10 | ENSDARP00000092445 | ENSDARP00000103524 | Calmegin. | DnaJ (Hsp40) homolog, subfamily C, member 10. | 0.618 |
clgn | si | ENSDARP00000092445 | ENSDARP00000138640 | Calmegin. | P-type domain-containing protein. | 0.445 |
dnajc10 | E9QJ85_DANRE | ENSDARP00000103524 | ENSDARP00000122942 | DnaJ (Hsp40) homolog, subfamily C, member 10. | Si:ch211-274f20.2. | 0.618 |
dnajc10 | canx | ENSDARP00000103524 | ENSDARP00000083454 | DnaJ (Hsp40) homolog, subfamily C, member 10. | Calnexin. | 0.619 |
dnajc10 | clgn | ENSDARP00000103524 | ENSDARP00000092445 | DnaJ (Hsp40) homolog, subfamily C, member 10. | Calmegin. | 0.618 |
dnajc10 | si | ENSDARP00000103524 | ENSDARP00000138640 | DnaJ (Hsp40) homolog, subfamily C, member 10. | P-type domain-containing protein. | 0.516 |
gne | pygb | ENSDARP00000137331 | ENSDARP00000025885 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.427 |
gne | pygl | ENSDARP00000137331 | ENSDARP00000123720 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.427 |
gne | pygma | ENSDARP00000137331 | ENSDARP00000072337 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.427 |
gne | si | ENSDARP00000137331 | ENSDARP00000138640 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | P-type domain-containing protein. | 0.465 |
gnptg | si | ENSDARP00000121022 | ENSDARP00000138640 | N-acetylglucosamine-1-phosphate transferase subunit gamma. | P-type domain-containing protein. | 0.570 |
prkcsh | E9QJ85_DANRE | ENSDARP00000025069 | ENSDARP00000122942 | Protein kinase C substrate 80K-H. | Si:ch211-274f20.2. | 0.586 |
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