Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A2BGQ8_DANRE | PDPR | ENSDARP00000073505 | ENSDARP00000139817 | N-acetylated alpha-linked acidic dipeptidase-like 1. | Si:cabz01113374.3. | 0.810 |
A2BGQ8_DANRE | shmt1 | ENSDARP00000073505 | ENSDARP00000069223 | N-acetylated alpha-linked acidic dipeptidase-like 1. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.554 |
PDPR | A2BGQ8_DANRE | ENSDARP00000139817 | ENSDARP00000073505 | Si:cabz01113374.3. | N-acetylated alpha-linked acidic dipeptidase-like 1. | 0.810 |
PDPR | gart | ENSDARP00000139817 | ENSDARP00000131447 | Si:cabz01113374.3. | Phosphoribosylglycinamide formyltransferase. | 0.802 |
PDPR | gcsha | ENSDARP00000139817 | ENSDARP00000110472 | Si:cabz01113374.3. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.928 |
PDPR | gcshb | ENSDARP00000139817 | ENSDARP00000134597 | Si:cabz01113374.3. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.928 |
PDPR | gldc | ENSDARP00000139817 | ENSDARP00000135421 | Si:cabz01113374.3. | Glycine dehydrogenase (decarboxylating). | 0.950 |
PDPR | mthfr | ENSDARP00000139817 | ENSDARP00000121987 | Si:cabz01113374.3. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.818 |
PDPR | shmt1 | ENSDARP00000139817 | ENSDARP00000069223 | Si:cabz01113374.3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.885 |
PDPR | shmt2 | ENSDARP00000139817 | ENSDARP00000132340 | Si:cabz01113374.3. | Serine hydroxymethyltransferase 2 (mitochondrial). | 0.788 |
PDPR | tha1 | ENSDARP00000139817 | ENSDARP00000012444 | Si:cabz01113374.3. | Threonine aldolase 1. | 0.795 |
PDPR | tyms | ENSDARP00000139817 | ENSDARP00000047068 | Si:cabz01113374.3. | Thymidylate synthetase. | 0.806 |
gart | PDPR | ENSDARP00000131447 | ENSDARP00000139817 | Phosphoribosylglycinamide formyltransferase. | Si:cabz01113374.3. | 0.802 |
gart | gcsha | ENSDARP00000131447 | ENSDARP00000110472 | Phosphoribosylglycinamide formyltransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.890 |
gart | gcshb | ENSDARP00000131447 | ENSDARP00000134597 | Phosphoribosylglycinamide formyltransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.890 |
gart | gldc | ENSDARP00000131447 | ENSDARP00000135421 | Phosphoribosylglycinamide formyltransferase. | Glycine dehydrogenase (decarboxylating). | 0.972 |
gart | mthfr | ENSDARP00000131447 | ENSDARP00000121987 | Phosphoribosylglycinamide formyltransferase. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.898 |
gart | shmt1 | ENSDARP00000131447 | ENSDARP00000069223 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.999 |
gart | shmt2 | ENSDARP00000131447 | ENSDARP00000132340 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase 2 (mitochondrial). | 0.999 |
gart | tha1 | ENSDARP00000131447 | ENSDARP00000012444 | Phosphoribosylglycinamide formyltransferase. | Threonine aldolase 1. | 0.661 |
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