STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grem1bGremlin 1b. (204 aa)    
Predicted Functional Partners:
bmp2a
Bone morphogenetic protein 2a.
    
 0.920
bmp2b
Bone morphogenetic protein 2b.
    
 0.904
bmp4
Bone morphogenetic protein 4.
    
 0.873
bmp7a
Bone morphogenetic protein 7a.
    
 0.811
gdf5
Growth differentiation factor 5.
    
 0.750
bmp16
Bone morphogenetic protein 16.
    
 0.715
bmp6
Bone morphogenetic protein 6.
    
 0.712
bmp5
Bone morphogenetic protein 5.
    
 0.700
gdf7
Growth differentiation factor 7.
    
 0.679
amh
Anti-Mullerian hormone.
    
  0.658
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.