STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100534805Translational activator of mitochondrially encoded cytochrome c oxidase I. (308 aa)    
Predicted Functional Partners:
pet100
PET100 cytochrome c oxidase chaperone.
      
 0.822
lipt1
Lipoyltransferase 1.
      
 0.814
bcs1l
Mitochondrial chaperone BCS1; Chaperone necessary for the assembly of mitochondrial respiratory chain complex III; Belongs to the AAA ATPase family. BCS1 subfamily.
  
  
 0.783
ethe1
ETHE1 persulfide dioxygenase.
     
 0.758
cox10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
  
 0.757
cox15
Cytochrome c oxidase assembly homolog 15 (yeast).
   
  
 0.754
lrpprc
Leucine-rich pentatricopeptide repeat-containing.
      
 0.734
pip5k1bb
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
    
 
 0.730
pip5k1cb
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b.
    
 
 0.730
tpk1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
     
 0.721
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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