STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc6a11bTransporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (568 aa)    
Predicted Functional Partners:
adprhl1
[Protein ADP-ribosylarginine] hydrolase-like protein 1; Belongs to the ADP-ribosylglycohydrolase family.
      
 0.803
pdzk1
PDZ domain-containing 1.
    
 
 0.755
mogat3b
Monoacylglycerol O-acyltransferase 3b.
   
  
 0.649
LOC101886648
Uncharacterized protein.
      
 0.649
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
   
  
 0.563
E7F6N3_DANRE
Si:ch211-81n22.1.
      
 0.560
E7EZI9_DANRE
Si:ch211-195e19.1.
      
 0.560
ENSDARP00000150236
Si:ch1073-416j23.1.
      
 0.559
irak1
Interleukin-1 receptor-associated kinase 1.
      
 0.557
aldh1l1
10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily.
   
  
 0.545
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.