STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbfbCore-binding factor subunit beta. (201 aa)    
Predicted Functional Partners:
runx1
Runt-related transcription factor.
    
 0.992
runx3
Runt-related transcription factor.
    
 0.984
runx2a
Runt-related transcription factor.
    
 0.947
aicda
Activation-induced cytidine deaminase.
    
 
 0.932
cul5a
Cullin 5a; Belongs to the cullin family.
    
 
 0.910
cul5b
Cullin 5b; Belongs to the cullin family.
    
 
 0.910
eloca
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.905
elocb
Elongin C paralog b; Belongs to the SKP1 family.
    
 
 0.905
elob
Elongin B.
    
 
 0.874
X1WBN9_DANRE
Uncharacterized protein.
    
 
 0.874
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.