STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1504 aa)    
Predicted Functional Partners:
ENSDARP00000151894
Uncharacterized protein.
    
 0.948
LOC103911449
Ig-like domain-containing protein.
 
      0.898
ppfia2
PTPRF-interacting protein alpha 2.
    
 0.878
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.862
il1rapl2
Interleukin 1 receptor accessory protein-like 2.
    
 0.839
il1rapl1b
Interleukin-1 receptor accessory protein-like 1-B; May regulate secretion and presynaptic differentiation through inhibition of the activity of N-type voltage-gated calcium channel. During presynaptic differentiation may regulate both synaptic vesicle accumulation in axon terminals and subsequent axon terminal remodeling.
    
 0.819
btbd9
BTB (POZ) domain-containing 9.
      
 0.810
kiaa1958
Si:ch211-126i22.5.
      
 0.804
ppfia4
PTPRF-interacting protein alpha 4.
    
 0.795
bud13
BUD13 homolog.
      
 0.743
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.