STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anxa1dAnnexin. (340 aa)    
Predicted Functional Partners:
acta1b
Actin alpha 1, skeletal muscle b.
   
 
 0.822
dysf
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
   
 
 0.802
tsg101a
Tumor susceptibility 101a.
    
 
 0.518
il10
Interleukin-10.
      
 0.515
casp3a
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
  
 0.505
casp3b
Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.
   
  
 0.505
myofl
Myoferlin-like.
   
 
 0.498
cd63
Tetraspanin.
      
 0.490
fpr1
Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.453
cd81a
Tetraspanin.
      
 0.452
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.