STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDARP00000147997Ig-like domain-containing protein. (107 aa)    
Predicted Functional Partners:
tfpia
Tissue factor pathway inhibitor.
    
   0.544
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.531
ighv8-3
Immunoglobulin heavy variable 8-3.
  
 
 0.529
ighv5-1
Immunoglobulin heavy variable 5-1.
  
 
 0.509
plaua
Urokinase-type plasminogen activator a; Belongs to the peptidase S1 family.
    
   0.493
mapta
Microtubule-associated protein.
    
   0.493
map2
Microtubule-associated protein 2.
    
   0.493
plat
Plasminogen activator; Belongs to the peptidase S1 family.
    
   0.493
maptb
Microtubule-associated protein.
    
   0.493
plaub
Urokinase-type plasminogen activator b.
    
   0.493
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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