STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101883087Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
pptc7a
Protein phosphatase PTC7 homolog; Protein phosphatase which positively regulates biosynthesis of the ubiquinone, coenzyme Q (By similarity). Dephosphorylates the ubiquinone biosynthesis protein coq7 which is likely to lead to its activation (By similarity).
      
 0.952
pptc7b
Protein phosphatase; Belongs to the PP2C family.
      
 0.951
nat8l
N-acetylaspartate synthetase; May play a role in the regulation of lipogenesis by producing N-acetylaspartate acid (NAA), a brain-specific metabolite. May promote dopamine uptake by regulating TNF-alpha expression (By similarity).
      
 0.857
bub3
BUB3 mitotic checkpoint protein.
   
 
 0.748
B0S5P1_DANRE
Si:dkey-88n24.10.
    
 
 0.632
F1QXN0_DANRE
Si:dkey-192d15.3.
    
 
 0.632
E9QBB4_DANRE
Si:ch211-225k7.3.
    
 
 0.632
A3QJT8_DANRE
Si:ch211-225k7.2.
    
 
 0.632
bsk146
Serine/threonine-protein kinase SBK1; May be involved in the control of neuronal proliferation or migration in the brain of embryos; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.523
sox18
SRY-box transcription factor 18.
    
 
 0.513
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.