STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zmp:0000000896Guanylate kinase-like domain-containing protein. (259 aa)    
Predicted Functional Partners:
cdc27
Cell division cycle 27.
    
 0.680
caska
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 
 0.544
caskb
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 
 0.544
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
  
 0.523
zgc:174895
Zgc:174895.
  
 
 0.504
aprt
Adenine phosphoribosyltransferase.
  
 
 0.504
gart
Phosphoribosylglycinamide formyltransferase.
  
 
 0.503
malt2
MALT paracaspase 2.
    
 
 0.480
malt1
MALT paracaspase 1.
    
 
 0.480
malt3
MALT paracaspase 3.
    
 
 0.480
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.