STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDARP00000154609Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
ehbp1l1b
EH domain-binding protein 1-like 1b.
   
 0.638
ehbp1
EH domain-binding protein 1.
   
 0.638
ehbp1l1a
EH domain-binding protein 1-like 1a.
   
 0.638
gas2l3
Growth arrest-specific 2-like 3.
   
 0.636
smtnb
Smoothelin b.
   
 
 0.570
smtna
Smoothelin a.
   
 
 0.570
smtnl1
Smoothelin-like 1.
   
 
 0.568
pdlim1
PDZ and LIM domain 1 (elfin).
   
 
 0.562
ldb3a
Cypher/ZASP splice variant 1 gamma.
    
  0.558
ldb3b
LIM domain-binding 3b.
    
 
0.558
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.