STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf609bZinc finger protein 609b. (1376 aa)    
Predicted Functional Partners:
mbnl3
Muscleblind-like-splicing regulator 3.
   
  
 0.761
shprh
SNF2 histone linker PHD RING helicase.
   
  
 0.757
mbnl1
Muscleblind-like-splicing regulator 1.
      
 0.747
eif4g2b
Eukaryotic translation initiation factor 4, gamma 2b.
   
  
 0.711
ankrd52a
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C; Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.
   
  
 0.667
ythdf3
YTH N(6)-methyladenosine RNA-binding protein 3.
   
  
 0.654
purbb
Transcriptional activator protein Pur-beta; May bind repeated elements in single-stranded DNA and may participate in transcriptional and translational gene regulation. Belongs to the PUR DNA-binding protein family.
   
  
 0.614
fbxw7
F-box and WD repeat domain-containing 7.
   
  
 0.592
itcha
E3 ubiquitin-protein ligase.
      
 0.542
pabpn1
Poly(A)-binding protein, nuclear 1.
   
  
 0.494
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.