STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5W_08070C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
Q5W_08065
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
Q5W_08075
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
Q5W_23040
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.726
Q5W_23045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.726
Q5W_24615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.718
Q5W_13030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.711
Q5W_24620
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.710
Q5W_01225
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.684
Q5W_13040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.677
Q5W_08060
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
Your Current Organism:
Hydrogenophaga sp. PBC
NCBI taxonomy Id: 795665
Other names: H. sp. PBC
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