STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydB-2Protein involved in oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor and generation of precursor metabolites and energy. (336 aa)    
Predicted Functional Partners:
MW7_1492
Cytochrome bd ubiquinol oxidase subunit i; Protein involved in oxidoreductase activity and oxidation reduction.
 0.999
MW7_0795
Cytochrome D ubiquinol oxidase subunit I; Protein involved in oxidoreductase activity and oxidation reduction.
 
 0.993
cydD
Cytochrome bd biosynthesis ABC superfamily ATP binding cassette transporter, ABC/permease protein; Protein involved in ATP binding and cellular process.
  
  
 0.852
cydC
ABC superfamily ATP binding cassette transporter, ABC protein; Protein involved in ATP binding and transmembrane transport.
  
  
 0.825
MW7_1494
Hypothetical protein.
       0.773
cydX
YbgT protein of hypothetical function.
  
 
 0.731
MW7_0161
Tungsten-containing formate dehydrogenase beta subunit; Protein involved in NADH dehydrogenase (ubiquinone) activity and mitochondrial electron transport, NADH to ubiquinone.
     
 0.663
MW7_1274
NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
    
 0.634
MW7_1491
Hypothetical protein.
 
     0.606
nuoH
NADH dehydrogenase subunit h; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.574
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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