STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_1517Phage integrase / Tyr recombinase protein; Protein involved in DNA binding and DNA recombination. (342 aa)    
Predicted Functional Partners:
MW7_2820
Protein involved in DNA-directed DNA polymerase activity and DNA replication initiation.
  
     0.738
MW7_2232
Protein involved in DNA repair.
  
     0.721
MW7_2222
GspL protein.
  
     0.714
MW7_1830
Hypothetical protein.
  
     0.706
MW7_2078
Putative transmembrane protein.
  
     0.697
MW7_0423
Hydrolase/acyltransferase; Protein involved in acyltransferase activity and acyl-carrier-protein biosynthetic process.
  
  
 0.650
MW7_2465
Gramicidin s biosynthesis protein.
  
     0.628
hemDX
Bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Protein involved in uroporphyrinogen-III synthase activity and heme biosynthetic process.
  
     0.603
galE
Protein involved in nucleotide binding and galactose metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.592
MW7_1412
Sigme-e factor negative regulatory protein; Protein involved in sigma factor antagonist activity and regulation of transcription.
  
     0.582
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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