STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_1734Glycolate oxidase subunit glcD; Protein involved in UDP-N-acetylmuramate dehydrogenase activity and amino sugar metabolic process. (469 aa)    
Predicted Functional Partners:
glcE
Glycolate oxidase FAD binding subunit; Protein involved in UDP-N-acetylmuramate dehydrogenase activity and amino sugar metabolic process.
 
 0.844
MW7_1865
Transketolase; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor and metabolic process.
    
 0.823
MW7_3281
Glutamate synthase, large subunit; Protein involved in glutamate synthase (NADPH) activity and electron transport.
    
 0.807
MW7_1735
Transmembrane lipoprotein.
       0.800
wrbA
Multimeric flavodoxin WrbA; Protein involved in electron carrier activity and electron transport.
       0.789
MW7_2457
Ferredoxin; Protein involved in electron carrier activity and electron transport.
   
 0.750
ubiA
UbiA protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.749
MW7_2535
L-lactate cytochrome reductase; Protein involved in FMN binding and oxidation reduction.
 0.741
MW7_2419
Protein involved in L-lactate dehydrogenase (cytochrome) activity and pyruvate metabolic process.
 0.734
MW7_0542
Three-component membrane-bound alcohol deshydrogenase, cytochrome C subunit (adhb); Protein involved in electron carrier activity and electron transport.
   
 0.731
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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