STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_1788GntR family transcriptional regulator; Protein involved in DNA binding and regulation of transcription. (282 aa)    
Predicted Functional Partners:
MW7_1789
Hypothetical protein.
       0.773
MW7_1790
Aconitase subunit 2; Protein involved in phosphorylation.
       0.773
MW7_3413
LacI family transcription regulator; Protein involved in DNA binding and regulation of transcription.
  
   
 0.615
MW7_1867
LacI family transcriptional regulator; Protein involved in DNA binding and transcription.
  
   
 0.574
MW7_1853
Transcriptional regulator LacI family; Protein involved in DNA binding and transcription.
  
   
 0.541
MW7_1687
GntR family transcriptional regulator; Protein involved in transcription factor activity and regulation of transcription.
  
    0.514
MW7_1787
Hypothetical protein.
       0.509
MW7_1791
Exported protein.
       0.494
MW7_2531
GntR family transcriptional regulator; Protein involved in transcription factor activity and regulation of transcription.
  
    0.486
MW7_0548
Cupin.
   
    0.408
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.