STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_1962Mg-dependent dnase; Protein involved in endodeoxyribonuclease activity, producing 5'-phosphomonoesters and DNA catabolic process. (243 aa)    
Predicted Functional Partners:
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
    
 0.885
MW7_1961
Ankyrin repeat-containing protein (ANK); Protein involved in protein binding.
       0.800
MW7_3129
Dinucleotide oligophosphate (alarmone) hydrolase; Protein involved in hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides.
      0.798
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
 0.712
rsmA
Ribosomal RNA small subunit methyltransferase A 3; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
 0.678
acpP
AcpP protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
      0.628
MW7_1964
DNA polymerase III subunit delta; Protein involved in DNA-directed DNA polymerase activity and DNA replication.
 
  
 0.625
fabD
Protein involved in [acyl-carrier-protein] S-malonyltransferase activity and fatty acid biosynthetic process.
      0.546
MW7_1963
Type 4 fimbrial biogenesis protein; Protein involved in cyclic-di-GMP binding.
  
    0.515
metG
MetG protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
   0.471
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.