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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_2001Protein involved in DNA binding and transcription. (260 aa)    
Predicted Functional Partners:
MW7_1687
GntR family transcriptional regulator; Protein involved in transcription factor activity and regulation of transcription.
  
    0.529
MW7_2002
Pfpi family intracellular protease; Protein involved in hydrolase activity.
  
    0.519
MW7_2531
GntR family transcriptional regulator; Protein involved in transcription factor activity and regulation of transcription.
  
    0.446
MW7_2003
Rieske (2Fe-2S) domain-containing protein; Protein involved in iron ion binding and cellular aromatic compound metabolic process.
       0.438
MW7_2004
Methanesulfonate monooxygenase, hydroxylase beta subunit.
       0.438
MW7_2006
Methanesulfonate monooxygenase component; Protein involved in electron carrier activity and electron transport.
  
    0.434
MW7_2005
MsmC; Protein involved in oxidoreductase activity and oxidation reduction.
       0.433
MW7_3413
LacI family transcription regulator; Protein involved in DNA binding and regulation of transcription.
  
   
 0.416
MW7_0548
Cupin.
   
    0.408
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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