Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MW7_2012DNA polymerase bacteriophage-type,uracil-DNA glycosylase superfamily; Protein involved in nucleotidyltransferase activity. (294 aa)    
Predicted Functional Partners:
tsaB
Glycoprotease family protein; Protein involved in metalloendopeptidase activity and proteolysis.
  
    0.922
rimI
Acetylase for 30S ribosomal subunit protein s18; Protein involved in N-acetyltransferase activity and N-terminal protein amino acid acetylation.
  
    0.852
MW7_2011
Hypothetical protein.
       0.831
MW7_3074
Putative carboxylase; Protein involved in catalytic activity.
  
    0.737
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
      0.710
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
    0.682
ssb
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
 
 0.618
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
    
 0.599
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.566
flgC
Flagellar basal-body rod protein FlgC; Protein involved in motor activity and ciliary or flagellar motility; Belongs to the flagella basal body rod proteins family.
    
   0.525
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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