STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_2194Putative D-amino-acid dehydrogenase (dadA); Protein involved in oxidoreductase activity and oxidation reduction. (419 aa)    
Predicted Functional Partners:
MW7_2514
Sarcosine oxidase subunit alpha; Protein involved in aminomethyltransferase activity and glycine catabolic process; Belongs to the GcvT family.
 
 0.981
MW7_2515
Protein involved in sarcosine oxidase activity and glycine metabolic process.
 
 0.797
MW7_3281
Glutamate synthase, large subunit; Protein involved in glutamate synthase (NADPH) activity and electron transport.
  
 
 0.745
MW7_2513
Sarcosine oxidase subunit gamma.
 
 0.742
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.688
MW7_2193
ABC superfamily ATP binding cassette transporter, membrane protein; Protein involved in transporter activity and transport.
 
    0.684
MW7_2195
Fad dependent oxidoreductase; Protein involved in oxidoreductase activity and oxidation reduction.
 
     0.681
dadA
D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids.
  
  
 
0.615
MW7_2419
Protein involved in L-lactate dehydrogenase (cytochrome) activity and pyruvate metabolic process.
  
 
 0.609
MW7_2535
L-lactate cytochrome reductase; Protein involved in FMN binding and oxidation reduction.
  
 
 0.609
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.