STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_2425D-3-phosphoglycerate dehydrogenase; Protein involved in nucleotide binding and glycine metabolic process. (318 aa)    
Predicted Functional Partners:
serC
3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 0.813
MW7_1116
Deacetylase protein.
   
 0.718
MW7_1810
Histone deacetylase; Protein involved in hydrolase activity.
   
 0.718
MW7_1865
Transketolase; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor and metabolic process.
   
 0.699
MW7_2264
Fad/fmn binding Fe-S oxidoreductase; Protein involved in UDP-N-acetylmuramate dehydrogenase activity and amino sugar metabolic process.
    
 0.637
MW7_3057
Malic enzyme; Protein involved in malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity and pyruvate metabolic process.
    
  0.635
MW7_3155
Malic enzyme; Protein involved in malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity and pyruvate metabolic process.
    
  0.635
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.619
MW7_1388
Protein involved in glyoxylate reductase activity and glyoxylate metabolic process; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
0.619
MW7_2108
Protein involved in hydroxypyruvate isomerase activity and pyruvate metabolic process; Belongs to the hyi family.
  
 
  0.580
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.