Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
glkGlucokinase; Protein involved in glucokinase activity and starch metabolic process; Belongs to the bacterial glucokinase family. (334 aa)    
Predicted Functional Partners:
pgi
Protein involved in glucose-6-phosphate isomerase activity and starch metabolic process; Belongs to the GPI family.
 
  
 0.964
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.921
tkt
Transketolase; Protein involved in transketolase activity and pentose-phosphate shunt; Belongs to the transketolase family.
    
 0.886
tkt-2
Transketolase; Protein involved in transketolase activity and pentose-phosphate shunt; Belongs to the transketolase family.
    
 0.886
MW7_1865
Transketolase; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor and metabolic process.
     
 0.879
MW7_0748
Phosphomannomutase or phosphoglucomutase protein; Protein involved in magnesium ion binding and carbohydrate metabolic process.
    
 0.877
ilvD
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.854
MW7_1684
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.854
ilvD-2
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.854
MW7_2306
Hydroxypyruvate reductase; Protein involved in glycerate dehydrogenase activity and glycine metabolic process.
 
  
  0.843
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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