STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; Protein involved in glucokinase activity and starch metabolic process; Belongs to the bacterial glucokinase family. (334 aa)    
Predicted Functional Partners:
pgi
Protein involved in glucose-6-phosphate isomerase activity and starch metabolic process; Belongs to the GPI family.
 
  
 0.914
ilvD
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.855
MW7_1684
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.855
ilvD-2
Protein involved in dihydroxy-acid dehydratase activity and isoleucine biosynthetic process; Belongs to the IlvD/Edd family.
  
 
 0.855
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
 
 0.822
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.811
gap
Protein involved in glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity and gluconeogenesis; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.807
tkt
Transketolase; Protein involved in transketolase activity and pentose-phosphate shunt; Belongs to the transketolase family.
    
 0.804
tkt-2
Transketolase; Protein involved in transketolase activity and pentose-phosphate shunt; Belongs to the transketolase family.
    
 0.804
MW7_0748
Phosphomannomutase or phosphoglucomutase protein; Protein involved in magnesium ion binding and carbohydrate metabolic process.
    
 0.801
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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