STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilBProtein involved in ATP binding and pilus assembly. (574 aa)    
Predicted Functional Partners:
MW7_3119
Type IV pilus assembly protein PilC; Protein involved in protein transporter activity and protein secretion by the type II secretion system.
 
 0.993
gspF
General secretion pathway protein F; Protein involved in protein transporter activity and protein secretion by the type II secretion system.
 
 0.972
MW7_3118
Type iv pilus prepilin leader peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.967
MW7_2222
GspL protein.
  
 
 0.947
gspG
General secretion pathway protein G; Protein involved in protein transporter activity and protein secretion by the type II secretion system.
 
 0.914
MW7_3273
Tfp pilus assembly protein PilN.
 
 
 
 0.905
MW7_1963
Type 4 fimbrial biogenesis protein; Protein involved in cyclic-di-GMP binding.
  
 
 
 0.888
gspI
Protein involved in protein transporter activity and protein secretion by the type II secretion system.
  
 0.840
gspH
Type II secretion system protein h; Protein involved in protein transporter activity and protein secretion by the type II secretion system.
  
 0.837
pilM
Type IV pilus assembly protein PilM; Protein involved in cell cycle.
 
 
 
 0.817
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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