STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK30336.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
KXK30338.1
Hypothetical protein.
 
     0.950
KXK30337.1
ATPase.
 
     0.948
KXK30340.1
T4 bacteriophage base plate protein.
 
     0.947
KXK30333.1
Hypothetical protein.
 
     0.896
KXK30335.1
Hypothetical protein.
 
     0.896
KXK30341.1
Putative phage protein.
 
     0.896
KXK30342.1
Putative phage tail sheath protein.
 
     0.883
KXK30331.1
Hypothetical protein.
 
     0.841
KXK30330.1
Putative phage baseplate lysozyme.
 
     0.831
KXK30329.1
Hypothetical protein.
 
     0.821
Your Current Organism:
Brocadia sinica
NCBI taxonomy Id: 795830
Other names: C. Brocadia sinica, Candidatus Brocadia sinica, Candidatus Brocadia sp. AMX_GB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.