STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK29585.1Putative flavoprotein. (398 aa)    
Predicted Functional Partners:
KXK28874.1
Putative rubredoxin.
 
 
 0.784
KXK32107.1
Pyridine nucleotide-disulfide oxidoreductase.
   
 0.729
KXK29465.1
Superoxide reductase.
  
  
 0.656
KXK31632.1
Two-component sensor kinase.
    
  0.637
KXK27916.1
Putative phosphohydrolase.
    
  0.617
KXK30123.1
Metal-binding protein.
  
  
 0.545
KXK26123.1
Myohemerythrin (MHR).
  
  
 0.545
KXK32298.1
Two-component response regulator.
    
  0.515
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
       0.493
KXK30182.1
Putative diguanylate cyclase.
    
  0.477
Your Current Organism:
Brocadia sinica
NCBI taxonomy Id: 795830
Other names: C. Brocadia sinica, Candidatus Brocadia sinica, Candidatus Brocadia sp. AMX_GB
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