STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0LSQ7BQ5605_C015g07740 protein. (987 aa)    
Predicted Functional Partners:
A0A2X0MPE3
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.991
A0A2X0MVD0
BQ5605_C003g02119 protein.
   
   0.981
A0A2X0PBH1
BQ5605_C004g03016 protein.
   
 
 0.981
A0A2X0N7H9
BQ5605_C023g09695 protein.
   
 
 0.980
A0A2X0LW83
BQ5605_C019g08940 protein.
   
 0.974
A0A2X0LW35
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.971
A0A2X0LVU6
BQ5605_C016g08258 protein.
   
 0.967
A0A2X0P3F1
BQ5605_C007g04738 protein.
   
 0.961
A0A2X0PIB1
BQ5605_C032g11077 protein.
   
 
 0.959
A0A2X0PN70
BQ5605_C027g10293 protein.
   
  0.957
Your Current Organism:
Microbotryum silenesdioicae
NCBI taxonomy Id: 796604
Other names: M. silenes-dioicae, Microbotryum silenes-dioicae, Microbotryum silenes-dioicae T. Giraud, Denchev & M.E. Hood 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.