Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argF | argH | BMMGA3_04450 | BMMGA3_13165 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.964 |
| argF | argJ | BMMGA3_04450 | BMMGA3_04425 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.995 |
| argF | rocD | BMMGA3_04450 | BMMGA3_14060 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.874 |
| argF | rocF | BMMGA3_04450 | BMMGA3_00985 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Belongs to the arginase family. | 0.913 |
| argF | yodQ | BMMGA3_04450 | BMMGA3_10145 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative metallohydrolase YodQ. | 0.924 |
| argH | argF | BMMGA3_13165 | BMMGA3_04450 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.964 |
| argH | argJ | BMMGA3_13165 | BMMGA3_04425 | Argininosuccinate lyase. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.928 |
| argH | rocD | BMMGA3_13165 | BMMGA3_14060 | Argininosuccinate lyase. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.781 |
| argH | rocF | BMMGA3_13165 | BMMGA3_00985 | Argininosuccinate lyase. | Arginase; Belongs to the arginase family. | 0.822 |
| argH | speA | BMMGA3_13165 | BMMGA3_05340 | Argininosuccinate lyase. | Arginine decarboxylase. | 0.815 |
| argJ | argF | BMMGA3_04425 | BMMGA3_04450 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.995 |
| argJ | argH | BMMGA3_04425 | BMMGA3_13165 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Argininosuccinate lyase. | 0.928 |
| argJ | rocD | BMMGA3_04425 | BMMGA3_14060 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.704 |
| argJ | rocF | BMMGA3_04425 | BMMGA3_00985 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Arginase; Belongs to the arginase family. | 0.916 |
| argJ | yodQ | BMMGA3_04425 | BMMGA3_10145 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Putative metallohydrolase YodQ. | 0.916 |
| hutH | rocF | BMMGA3_03225 | BMMGA3_00985 | Histidine ammonia-lyase. | Arginase; Belongs to the arginase family. | 0.545 |
| rocD | argF | BMMGA3_14060 | BMMGA3_04450 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.874 |
| rocD | argH | BMMGA3_14060 | BMMGA3_13165 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Argininosuccinate lyase. | 0.781 |
| rocD | argJ | BMMGA3_14060 | BMMGA3_04425 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.704 |
| rocD | rocF | BMMGA3_14060 | BMMGA3_00985 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Arginase; Belongs to the arginase family. | 0.987 |
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