STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE58872.1Copper resistance protein. (555 aa)    
Predicted Functional Partners:
AIE58871.1
Hypothetical protein.
 
  
 0.999
AIE60186.1
Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.866
AIE60347.1
Iron-regulated membrane protein.
  
    0.684
AIE60252.1
Hypothetical protein.
     
 0.579
fruR
Putative HTH-type transcriptional regulator FruR.
  
  
 0.579
cotA
Spore coat protein A.
     
 0.578
pheA
Prephenate dehydratase.
     
 0.555
AIE60248.1
Hypothetical protein.
     
 0.539
AIE61114.1
Hypothetical protein.
     
 0.539
ctaG
Protein CtaG.
     
 0.530
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.