Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE58908.1 | AIE59581.1 | BMMGA3_02190 | BMMGA3_05765 | Hypothetical protein. | Hypothetical protein. | 0.446 |
AIE58908.1 | adcA | BMMGA3_02190 | BMMGA3_03350 | Hypothetical protein. | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | 0.560 |
AIE58908.1 | folE2 | BMMGA3_02190 | BMMGA3_02185 | Hypothetical protein. | GTP cyclohydrolase folE2; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.537 |
AIE58908.1 | rpmB | BMMGA3_02190 | BMMGA3_05920 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.497 |
AIE58908.1 | rpsN | BMMGA3_02190 | BMMGA3_02170 | Hypothetical protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.521 |
AIE58908.1 | rpsZ | BMMGA3_02190 | BMMGA3_00760 | Hypothetical protein. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.521 |
AIE58908.1 | yteA | BMMGA3_02190 | BMMGA3_06925 | Hypothetical protein. | Putative protein YteA. | 0.446 |
AIE59581.1 | AIE58908.1 | BMMGA3_05765 | BMMGA3_02190 | Hypothetical protein. | Hypothetical protein. | 0.446 |
adcA | AIE58908.1 | BMMGA3_03350 | BMMGA3_02190 | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein. | 0.560 |
adcA | rpmB | BMMGA3_03350 | BMMGA3_05920 | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.695 |
adcA | rpsN | BMMGA3_03350 | BMMGA3_02170 | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.565 |
adcA | rpsZ | BMMGA3_03350 | BMMGA3_00760 | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.565 |
folE2 | AIE58908.1 | BMMGA3_02185 | BMMGA3_02190 | GTP cyclohydrolase folE2; Converts GTP to 7,8-dihydroneopterin triphosphate. | Hypothetical protein. | 0.537 |
folE2 | rpsN | BMMGA3_02185 | BMMGA3_02170 | GTP cyclohydrolase folE2; Converts GTP to 7,8-dihydroneopterin triphosphate. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.581 |
rpmB | AIE58908.1 | BMMGA3_05920 | BMMGA3_02190 | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | Hypothetical protein. | 0.497 |
rpmB | adcA | BMMGA3_05920 | BMMGA3_03350 | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | 0.695 |
rpmB | rpsN | BMMGA3_05920 | BMMGA3_02170 | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.940 |
rpmB | rpsZ | BMMGA3_05920 | BMMGA3_00760 | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.940 |
rpsN | AIE58908.1 | BMMGA3_02170 | BMMGA3_02190 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | Hypothetical protein. | 0.521 |
rpsN | adcA | BMMGA3_02170 | BMMGA3_03350 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | Putative zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family. | 0.565 |
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