Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE58965.1 | AIE58966.1 | BMMGA3_02505 | BMMGA3_02510 | Putative L-lysine 2,3-aminomutase. | OsmC family protein. | 0.423 |
AIE58965.1 | AIE60424.1 | BMMGA3_02505 | BMMGA3_10140 | Putative L-lysine 2,3-aminomutase. | GCN5-related N-acetyltransferase. | 0.566 |
AIE58965.1 | cheR | BMMGA3_02505 | BMMGA3_10750 | Putative L-lysine 2,3-aminomutase. | Chemotaxis protein methyltransferase. | 0.681 |
AIE58965.1 | hom1 | BMMGA3_02505 | BMMGA3_14225 | Putative L-lysine 2,3-aminomutase. | Homoserine dehydrogenase. | 0.595 |
AIE58966.1 | AIE58965.1 | BMMGA3_02510 | BMMGA3_02505 | OsmC family protein. | Putative L-lysine 2,3-aminomutase. | 0.423 |
AIE60424.1 | AIE58965.1 | BMMGA3_10140 | BMMGA3_02505 | GCN5-related N-acetyltransferase. | Putative L-lysine 2,3-aminomutase. | 0.566 |
cheR | AIE58965.1 | BMMGA3_10750 | BMMGA3_02505 | Chemotaxis protein methyltransferase. | Putative L-lysine 2,3-aminomutase. | 0.681 |
hom1 | AIE58965.1 | BMMGA3_14225 | BMMGA3_02505 | Homoserine dehydrogenase. | Putative L-lysine 2,3-aminomutase. | 0.595 |