STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFOligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (311 aa)    
Predicted Functional Partners:
oppC
Oligopeptide transport system permease protein OppC.
 
 0.999
oppB
Oligopeptide transport system permease protein OppB.
 
 0.997
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
0.993
oppA
Oligopeptide-binding protein OppA.
 
 
 0.990
dppC
Dipeptide transport system permease protein DppC.
  
 0.985
dppB
Dipeptide transport system permease protein DppB.
  
 0.915
ecfT
Energy-coupling factor transporter transmembrane protein EcfT; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.848
AIE58989.1
Cobalt ABC transporter inner membrane subunit CbiQ.
  
 
 0.848
dppE
Dipeptide-binding protein DppE.
 
  
 0.813
dppD
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
  
0.755
Your Current Organism:
Bacillus methanolicus MGA3
NCBI taxonomy Id: 796606
Other names: B. methanolicus MGA3, Bacillus methanolicus str. MGA3, Bacillus methanolicus strain MGA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.