Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE59533.1 | AIE59536.1 | BMMGA3_05525 | BMMGA3_05540 | Hypothetical protein. | Methyltransferase. | 0.501 |
AIE59535.1 | AIE59536.1 | BMMGA3_05535 | BMMGA3_05540 | Hypothetical protein. | Methyltransferase. | 0.473 |
AIE59535.1 | coaD | BMMGA3_05535 | BMMGA3_05545 | Hypothetical protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.464 |
AIE59536.1 | AIE59533.1 | BMMGA3_05540 | BMMGA3_05525 | Methyltransferase. | Hypothetical protein. | 0.501 |
AIE59536.1 | AIE59535.1 | BMMGA3_05540 | BMMGA3_05535 | Methyltransferase. | Hypothetical protein. | 0.473 |
AIE59536.1 | AIE59996.1 | BMMGA3_05540 | BMMGA3_07940 | Methyltransferase. | Hypothetical protein. | 0.467 |
AIE59536.1 | AIE61123.1 | BMMGA3_05540 | BMMGA3_13665 | Methyltransferase. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.680 |
AIE59536.1 | coaD | BMMGA3_05540 | BMMGA3_05545 | Methyltransferase. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.936 |
AIE59536.1 | der | BMMGA3_05540 | BMMGA3_10810 | Methyltransferase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.523 |
AIE59536.1 | ftsY | BMMGA3_05540 | BMMGA3_05985 | Methyltransferase. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.488 |
AIE59536.1 | pyrH | BMMGA3_05540 | BMMGA3_06265 | Methyltransferase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.485 |
AIE59536.1 | recJ | BMMGA3_05540 | BMMGA3_12340 | Methyltransferase. | Single-stranded-DNA-specific exonuclease RecJ. | 0.610 |
AIE59536.1 | rnpA | BMMGA3_05540 | BMMGA3_16755 | Methyltransferase. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.579 |
AIE59996.1 | AIE59536.1 | BMMGA3_07940 | BMMGA3_05540 | Hypothetical protein. | Methyltransferase. | 0.467 |
AIE61123.1 | AIE59536.1 | BMMGA3_13665 | BMMGA3_05540 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Methyltransferase. | 0.680 |
AIE61123.1 | rnpA | BMMGA3_13665 | BMMGA3_16755 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.933 |
coaD | AIE59535.1 | BMMGA3_05545 | BMMGA3_05535 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Hypothetical protein. | 0.464 |
coaD | AIE59536.1 | BMMGA3_05545 | BMMGA3_05540 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Methyltransferase. | 0.936 |
der | AIE59536.1 | BMMGA3_10810 | BMMGA3_05540 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Methyltransferase. | 0.523 |
der | ftsY | BMMGA3_10810 | BMMGA3_05985 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.747 |
page 1 of 2